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You need to restart to get the prefs in "Scripts & Windows" to take effect in 0.9.9...
REPORTER: Can you check if the problem persists with a more recent build, and if it occurs after a restart as bz suggested. Please report back to this bug so that we can keep a good track of problems. Thanks for helping with mozilla.
wfm, as nobody can reproduce it. reopen if you canusing a recent build.
VERIFIED: WFM. You don't have to reboot anymore. Mozilla 1.4b, Win 98.